Welcome to Asymmetron’s documentation!

Asymmetron is a set of algorithms that enable the systematic investigation of strand asymmetries across biological problems.

Quick Summary

Brief summary of the problems and settings Asymmetron can be applied to.

Installation

Instructions for the installation of Asymmetron.

Introduction

Background information regarding strand asymmetries.

Instructions

Information on how to implement each of the different functions.

consecutive_patterns

contained_asymmetries

pairwise_asymmetries

orientation

Tutorial

We have developed a tutorial that explains how to implement each function and uses brief examples for each function to different biological problems.

Licence

Asymmetron is freely available under the APACHE LICENSE, VERSION 2.0 - The software can be freely used, modified or added to other pipelines and workflows.

Support

Contact information for questions, ideas, feature requests and potential bug reports.